Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B6YQX8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (B6YQX8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B6YQX8
- Type
- protein
- Length
- 1,119 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Protein translocase subunit seca
- UniProt
- B6YQX8
- Pockets
- 17 · best druggability 0.81
Structure
1 distinct chain · 56% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 1119 | 56% helix, 13% strand | B6YQX8 |
Pockets
17 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 718 | 0.81 | 0.85 | 75 | empty |
| 2 | 1058 | 0.78 | 0.80 | 68 | empty |
| 3 | 52 | 0.70 | 0.98 | 19 | empty |
| 4 | 458 | 0.67 | 0.79 | 44 | empty |
| 5 | 252 | 0.61 | 0.80 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6YQX8
- Elsewhere: UniProt B6YQX8 · AlphaFold DB B6YQX8
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