Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A0JYG5)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (A0JYG5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0JYG5
- Type
- protein
- Length
- 912 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x65Aa444c599a2FAFaA573437756707F24918A5Fe
- Molecule
- Protein translocase subunit seca
- UniProt
- A0JYG5
- Pockets
- 8 · best druggability 0.77
Structure
1 distinct chain · 55% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 912 | 55% helix, 14% strand | A0JYG5 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1177 | 0.77 | 0.79 | 112 | empty |
| 2 | 483 | 0.72 | 0.82 | 46 | empty |
| 3 | 152 | 0.59 | 0.83 | 27 | empty |
| 4 | 120 | 0.41 | 0.76 | 20 | empty |
| 5 | 95 | 0.41 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0JYG5
- Elsewhere: UniProt A0JYG5 · AlphaFold DB A0JYG5
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