Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q06461)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q06461) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06461
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa2Ed4F896753518D47d6716F39fEbFd127Db4c57
- Molecule
- Protein translocase subunit seca
- UniProt
- Q06461
- Pockets
- 8 · best druggability 0.76
Structure
1 distinct chain · 59% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 878 | 59% helix, 11% strand | Q06461 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 879 | 0.76 | 0.79 | 80 | empty |
| 2 | 579 | 0.65 | 0.76 | 67 | empty |
| 3 | 162 | 0.59 | 0.83 | 27 | empty |
| 4 | 182 | 0.58 | 0.81 | 22 | empty |
| 5 | 93 | 0.46 | 0.81 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06461
- Elsewhere: UniProt Q06461 · AlphaFold DB Q06461
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