Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q5P9Q9)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca (Q5P9Q9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5P9Q9
- Type
- protein
- Length
- 872 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Protein translocase subunit seca
- UniProt
- Q5P9Q9
- Pockets
- 10 · best druggability 0.69
Structure
1 distinct chain · 56% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca | protein | 872 | 56% helix, 12% strand | Q5P9Q9 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 819 | 0.69 | 0.75 | 77 | empty |
| 2 | 448 | 0.67 | 0.79 | 49 | empty |
| 3 | 285 | 0.56 | 0.77 | 45 | empty |
| 4 | 250 | 0.54 | 0.77 | 37 | empty |
| 5 | 97 | 0.48 | 0.81 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5P9Q9
- Elsewhere: UniProt Q5P9Q9 · AlphaFold DB Q5P9Q9
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