Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 2 (Q6GDF3)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6GDF3
- Type
- protein
- Length
- 796 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Protein translocase subunit seca 2
- UniProt
- Q6GDF3
- Pockets
- 9 · best druggability 0.70
Structure
1 distinct chain · 57% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 2 | protein | 796 | 57% helix, 13% strand | Q6GDF3 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 420 | 0.70 | 0.82 | 48 | empty |
| 2 | 303 | 0.65 | 0.81 | 39 | empty |
| 3 | 232 | 0.58 | 0.80 | 33 | empty |
| 4 | 150 | 0.46 | 0.75 | 19 | empty |
| 5 | 102 | 0.39 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GDF3
- Elsewhere: UniProt Q6GDF3 · AlphaFold DB Q6GDF3
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