Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (Q8E3M6)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8E3M6
- Type
- protein
- Length
- 842 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9cB2a82c26C1c5E687c7AB3603b7c6C591B313c6
- Molecule
- Protein translocase subunit seca 1
- UniProt
- Q8E3M6
- Pockets
- 12 · best druggability 0.76
Structure
1 distinct chain · 55% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 842 | 55% helix, 11% strand | Q8E3M6 |
Pockets
12 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1096 | 0.76 | 0.78 | 86 | empty |
| 2 | 988 | 0.75 | 0.78 | 66 | empty |
| 3 | 569 | 0.68 | 0.78 | 58 | empty |
| 4 | 462 | 0.65 | 0.77 | 45 | empty |
| 5 | 172 | 0.58 | 0.82 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8E3M6
- Elsewhere: UniProt Q8E3M6 · AlphaFold DB Q8E3M6
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