Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (Q6GIN8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6GIN8
- Type
- protein
- Length
- 843 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- Protein translocase subunit seca 1
- UniProt
- Q6GIN8
- Pockets
- 7 · best druggability 0.81
Structure
1 distinct chain · 54% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 843 | 54% helix, 12% strand | Q6GIN8 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.81 | 0.82 | 119 | empty |
| 2 | 979 | 0.77 | 0.79 | 97 | empty |
| 3 | 107 | 0.53 | 0.83 | 22 | empty |
| 4 | 174 | 0.49 | 0.77 | 19 | empty |
| 5 | 122 | 0.48 | 0.79 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GIN8
- Elsewhere: UniProt Q6GIN8 · AlphaFold DB Q6GIN8
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