Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (Q2FIN8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2FIN8
- Type
- protein
- Length
- 843 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0FAc74Bf23fFf003DE1B308Db5D5D92f90E0bFbd
- Molecule
- Protein translocase subunit seca 1
- UniProt
- Q2FIN8
- Pockets
- 10 · best druggability 0.80
Structure
1 distinct chain · 54% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 843 | 54% helix, 12% strand | Q2FIN8 |
Pockets
10 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1070 | 0.80 | 0.82 | 85 | empty |
| 2 | 772 | 0.74 | 0.79 | 74 | empty |
| 3 | 280 | 0.62 | 0.80 | 25 | empty |
| 4 | 164 | 0.58 | 0.83 | 28 | empty |
| 5 | 119 | 0.57 | 0.84 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2FIN8
- Elsewhere: UniProt Q2FIN8 · AlphaFold DB Q2FIN8
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