Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (Q03GZ8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q03GZ8
- Type
- protein
- Length
- 786 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4B90C51942be0dE1D7B37C1DcDfC4fEd2eCF2c32
- Molecule
- Protein translocase subunit seca 1
- UniProt
- Q03GZ8
- Pockets
- 11 · best druggability 0.81
Structure
1 distinct chain · 57% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 786 | 57% helix, 12% strand | Q03GZ8 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1161 | 0.81 | 0.82 | 101 | empty |
| 2 | 277 | 0.59 | 0.79 | 38 | empty |
| 3 | 198 | 0.55 | 0.79 | 36 | empty |
| 4 | 95 | 0.53 | 0.83 | 15 | empty |
| 5 | 73 | 0.53 | 0.86 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03GZ8
- Elsewhere: UniProt Q03GZ8 · AlphaFold DB Q03GZ8
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