Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (P57996)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P57996
- Type
- protein
- Length
- 940 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Protein translocase subunit seca 1
- UniProt
- P57996
- Pockets
- 10 · best druggability 0.74
Structure
1 distinct chain · 53% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 940 | 53% helix, 12% strand | P57996 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 524 | 0.74 | 0.82 | 60 | empty |
| 2 | 653 | 0.69 | 0.77 | 72 | empty |
| 3 | 414 | 0.67 | 0.80 | 63 | empty |
| 4 | 379 | 0.65 | 0.79 | 36 | empty |
| 5 | 201 | 0.60 | 0.82 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57996
- Elsewhere: UniProt P57996 · AlphaFold DB P57996
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