Research workbench
AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1 (Q6NIR8)
Analyse AlphaFold monomer V2.0 prediction for protein translocase subunit seca 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NIR8
- Type
- protein
- Length
- 853 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xE4dDdE4F6dA9c2bAf0CCF2Ea7ebF1b7DF4f1421e
- Molecule
- Protein translocase subunit seca 1
- UniProt
- Q6NIR8
- Pockets
- 12 · best druggability 0.72
Structure
1 distinct chain · 58% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein translocase subunit seca 1 | protein | 853 | 58% helix, 11% strand | Q6NIR8 |
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 444 | 0.72 | 0.82 | 51 | empty |
| 2 | 295 | 0.58 | 0.77 | 46 | empty |
| 3 | 209 | 0.57 | 0.80 | 30 | empty |
| 4 | 105 | 0.57 | 0.85 | 20 | empty |
| 5 | 332 | 0.55 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NIR8
- Elsewhere: UniProt Q6NIR8 · AlphaFold DB Q6NIR8
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