Research workbench
AlphaFold monomer V2.0 prediction for exocyst complex component SEC8 (P32855)
Analyse AlphaFold monomer V2.0 prediction for exocyst complex component SEC8 (P32855) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P32855
- Type
- protein
- Length
- 1,065 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- Exocyst complex component SEC8
- UniProt
- P32855
- Pockets
- 17 · best druggability 0.66
Structure
1 distinct chain · 67% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Exocyst complex component SEC8 | protein | 1065 | 67% helix, 1% strand | P32855 |
Pockets
17 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 560 | 0.66 | 0.77 | 59 | empty |
| 2 | 160 | 0.62 | 0.84 | 28 | empty |
| 3 | 143 | 0.59 | 0.84 | 21 | empty |
| 4 | 101 | 0.55 | 0.84 | 20 | empty |
| 5 | 191 | 0.51 | 0.77 | 26 | empty |
Compared structures
- 5YFP · Cryo-EM Structure of the Exocyst Complex · an experimental structure of the same protein · chain A against D, TM-score 0.65
- 5YFP · Cryo-EM structure of the exocyst complex · an experimental structure of the same protein · chain A against D, TM-score 0.65
- 6VKL · Negative stain reconstruction of the yeast exocyst octameric complex. · an experimental structure of the same protein · chain A against D, TM-score 0.65
- 6VKL · Negative stain reconstruction of the yeast exocyst octameric complex. · an experimental structure of the same protein · chain A against D, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32855
- Elsewhere: UniProt P32855 · AlphaFold DB P32855
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