Research workbench
AlphaFold monomer V2.0 prediction for rab guanine nucleotide exchange factor SEC2 (Q5AL49)
Analyse AlphaFold monomer V2.0 prediction for rab guanine nucleotide exchange factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5AL49
- Type
- protein
- Length
- 751 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Rab guanine nucleotide exchange factor SEC2
- UniProt
- Q5AL49
- Pockets
- 6 · best druggability 0.56
Structure
1 distinct chain · 43% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rab guanine nucleotide exchange factor SEC2 | protein | 751 | 43% helix, 3% strand | Q5AL49 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 283 | 0.56 | 0.77 | 34 | empty |
| 2 | 207 | 0.52 | 0.76 | 23 | empty |
| 3 | 205 | 0.51 | 0.76 | 25 | empty |
| 4 | 96 | 0.36 | 0.75 | 15 | empty |
| 5 | 71 | 0.35 | 0.76 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5AL49
- Elsewhere: UniProt Q5AL49 · AlphaFold DB Q5AL49
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