Research workbench
AlphaFold monomer V2.0 prediction for ribosome maturation protein SDO1 homolog (O26781)
Analyse AlphaFold monomer V2.0 prediction for ribosome maturation protein SDO1 homolog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O26781
- Type
- protein
- Length
- 232 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4B8122b57F10612F243dd42D8a8F4DbA5bC520cf
- Molecule
- Ribosome maturation protein SDO1 homolog
- UniProt
- O26781
- Pockets
- 1 · best druggability 0.29
Structure
1 distinct chain · 44% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome maturation protein SDO1 homolog | protein | 232 | 44% helix, 25% strand | O26781 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.29 | 0.76 | 12 | empty |
Compared structures
- 2WBM · Crystal structure of mthSBDS, the homologue of the Shwachman-Bodian- Diamond syndrome… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 2WBM · Crystal structure of mthsbds, the homologue of the shwachman-bodian- diamond syndrome… · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O26781
- Elsewhere: UniProt O26781 · AlphaFold DB O26781
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