Research workbench
AlphaFold monomer V2.0 prediction for protein SDA1 homolog (A4IIB1)
Analyse AlphaFold monomer V2.0 prediction for protein SDA1 homolog (A4IIB1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4IIB1
- Type
- protein
- Length
- 689 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x10fEc0bA900d0Eb1c9cC218709e4459de0d71829
- Molecule
- Protein SDA1 homolog
- UniProt
- A4IIB1
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 62% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein SDA1 homolog | protein | 689 | 62% helix, 0% strand | A4IIB1 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 323 | 0.67 | 0.81 | 40 | empty |
| 2 | 422 | 0.66 | 0.79 | 42 | empty |
| 3 | 508 | 0.66 | 0.77 | 45 | empty |
| 4 | 174 | 0.51 | 0.78 | 34 | empty |
| 5 | 84 | 0.48 | 0.83 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4IIB1
- Elsewhere: UniProt A4IIB1 · AlphaFold DB A4IIB1
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