Research workbench
AlphaFold monomer V2.0 prediction for scavenger receptor class B member 1 (Q8SQC1)
Analyse AlphaFold monomer V2.0 prediction for scavenger receptor class B member 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8SQC1
- Type
- protein
- Length
- 509 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Scavenger receptor class B member 1
- UniProt
- Q8SQC1
- Pockets
- 3 · best druggability 0.84
Structure
1 distinct chain · 37% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scavenger receptor class B member 1 | protein | 509 | 37% helix, 28% strand | Q8SQC1 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 838 | 0.84 | 0.85 | 92 | empty |
| 2 | 198 | 0.56 | 0.79 | 27 | empty |
| 3 | 130 | 0.53 | 0.81 | 18 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SQC1
- Elsewhere: UniProt Q8SQC1 · AlphaFold DB Q8SQC1
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