Research workbench
AlphaFold monomer V2.0 prediction for scavenger receptor class B member 1 (O18824)
Analyse AlphaFold monomer V2.0 prediction for scavenger receptor class B member 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O18824
- Type
- protein
- Length
- 509 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcdea6AA8Fb25F42A8e87150f86F5BDEe506f522E
- Molecule
- Scavenger receptor class B member 1
- UniProt
- O18824
- Pockets
- 5 · best druggability 0.84
Structure
1 distinct chain · 38% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scavenger receptor class B member 1 | protein | 509 | 38% helix, 28% strand | O18824 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 836 | 0.84 | 0.86 | 89 | empty |
| 2 | 180 | 0.53 | 0.78 | 29 | empty |
| 3 | 109 | 0.44 | 0.78 | 18 | empty |
| 4 | 64 | 0.31 | 0.75 | 15 | empty |
| 5 | 71 | 0.29 | 0.73 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O18824
- Elsewhere: UniProt O18824 · AlphaFold DB O18824
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