Research workbench
AlphaFold monomer V2.0 prediction for amiloride-sensitive sodium channel subunit alpha (P55270)
Analyse AlphaFold monomer V2.0 prediction for amiloride-sensitive sodium channel… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55270
- Type
- protein
- Length
- 650 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x32Dd5B71E48E579114B6a52f6D2542974C43ED9C
- Molecule
- Amiloride-sensitive sodium channel subunit alpha
- UniProt
- P55270
- Pockets
- 9 · best druggability 0.67
Structure
1 distinct chain · 30% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Amiloride-sensitive sodium channel subunit alpha | protein | 650 | 30% helix, 19% strand | P55270 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 521 | 0.67 | 0.78 | 47 | empty |
| 2 | 208 | 0.52 | 0.76 | 22 | empty |
| 3 | 151 | 0.50 | 0.78 | 15 | empty |
| 4 | 87 | 0.50 | 0.83 | 16 | empty |
| 5 | 160 | 0.46 | 0.76 | 26 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55270
- Elsewhere: UniProt P55270 · AlphaFold DB P55270
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