Research workbench
AlphaFold monomer V2.0 prediction for sodium channel protein para (P35500)
Analyse AlphaFold monomer V2.0 prediction for sodium channel protein para (P35500) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P35500
- Type
- protein
- Length
- 2,131 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Sodium channel protein para
- UniProt
- P35500
- Pockets
- 20 · best druggability 0.84
Structure
1 distinct chain · 51% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein para | protein | 2131 | 51% helix, 3% strand | P35500 |
Pockets
20 pockets found on a 1 Å grid, 17 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1093 | 0.84 | 0.84 | 81 | empty |
| 2 | 706 | 0.70 | 0.77 | 73 | empty |
| 3 | 488 | 0.69 | 0.79 | 55 | empty |
| 4 | 844 | 0.69 | 0.75 | 82 | empty |
| 5 | 489 | 0.68 | 0.79 | 47 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35500
- Elsewhere: UniProt P35500 · AlphaFold DB P35500
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.