Research workbench
AlphaFold monomer V2.0 prediction for sodium channel protein type 9 subunit alpha (Q62205)
Analyse AlphaFold monomer V2.0 prediction for sodium channel protein type 9 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q62205
- Type
- protein
- Length
- 1,984 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf9efD8B618ef85CA2BCA3999e3Fb10b1502864Cd
- Molecule
- Sodium channel protein type 9 subunit alpha
- UniProt
- Q62205
- Pockets
- 20 · best druggability 0.86
Structure
1 distinct chain · 54% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein type 9 subunit alpha | protein | 1984 | 54% helix, 3% strand | Q62205 |
Pockets
20 pockets found on a 1 Å grid, 15 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1161 | 0.86 | 0.87 | 102 | empty |
| 2 | 862 | 0.75 | 0.79 | 81 | empty |
| 3 | 455 | 0.74 | 0.83 | 39 | empty |
| 4 | 568 | 0.68 | 0.78 | 45 | empty |
| 5 | 511 | 0.66 | 0.77 | 45 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q62205
- Elsewhere: UniProt Q62205 · AlphaFold DB Q62205
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