Research workbench
AlphaFold monomer V2.0 prediction for sodium channel protein type 2 subunit alpha (B1AWN6)
Analyse AlphaFold monomer V2.0 prediction for sodium channel protein type 2 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1AWN6
- Type
- protein
- Length
- 2,006 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Sodium channel protein type 2 subunit alpha
- UniProt
- B1AWN6
- Pockets
- 20 · best druggability 0.86
Structure
1 distinct chain · 52% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein type 2 subunit alpha | protein | 2006 | 52% helix, 3% strand | B1AWN6 |
Pockets
20 pockets found on a 1 Å grid, 16 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1085 | 0.86 | 0.86 | 97 | empty |
| 2 | 819 | 0.73 | 0.78 | 55 | empty |
| 3 | 1099 | 0.72 | 0.76 | 93 | empty |
| 4 | 506 | 0.68 | 0.79 | 45 | empty |
| 5 | 323 | 0.66 | 0.81 | 46 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1AWN6
- Elsewhere: UniProt B1AWN6 · AlphaFold DB B1AWN6
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