Research workbench
AlphaFold monomer V2.0 prediction for intron-encoded DNA endonuclease AI4 (P03878)
Analyse AlphaFold monomer V2.0 prediction for intron-encoded DNA endonuclease AI4… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P03878
- Type
- protein
- Length
- 556 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa0269D2f8346f93BD986199F0B310E8F43873427
- Molecule
- Intron-encoded DNA endonuclease AI4
- UniProt
- P03878
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 66% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Intron-encoded DNA endonuclease AI4 | protein | 556 | 66% helix, 10% strand | P03878 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.72 | 0.99 | 22 | empty |
| 2 | 257 | 0.55 | 0.76 | 32 | empty |
| 3 | 266 | 0.49 | 0.73 | 35 | empty |
| 4 | 93 | 0.43 | 0.78 | 21 | empty |
| 5 | 113 | 0.42 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03878
- Elsewhere: UniProt P03878 · AlphaFold DB P03878
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