Research workbench
AlphaFold monomer V2.0 prediction for S phase cyclin a-associated protein in the endoplasmic reticulum (Q9BY12)
Analyse AlphaFold monomer V2.0 prediction for S phase cyclin a-associated protein in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BY12
- Type
- protein
- Length
- 1,400 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- S phase cyclin a-associated protein in the endoplasmic reticulum
- UniProt
- Q9BY12
- Pockets
- 8 · best druggability 0.72
Structure
1 distinct chain · 54% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S phase cyclin a-associated protein in the endoplasmic reticulum | protein | 1400 | 54% helix, 1% strand | Q9BY12 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 787 | 0.72 | 0.77 | 70 | empty |
| 2 | 695 | 0.65 | 0.75 | 59 | empty |
| 3 | 289 | 0.59 | 0.78 | 38 | empty |
| 4 | 286 | 0.52 | 0.74 | 39 | empty |
| 5 | 65 | 0.45 | 0.83 | 18 | empty |
Compared structures
- 8BPO · Structure of rabbit 80S ribosome translating beta-tubulin in complex with… · an experimental structure of the same protein · chain A against s2, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BY12
- Elsewhere: UniProt Q9BY12 · AlphaFold DB Q9BY12
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