Research workbench
AlphaFold monomer V2.0 prediction for sodium-dependent dopamine transporter (Q61327)
Analyse AlphaFold monomer V2.0 prediction for sodium-dependent dopamine transporter… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q61327
- Type
- protein
- Length
- 619 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Sodium-dependent dopamine transporter
- UniProt
- Q61327
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 67% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium-dependent dopamine transporter | protein | 619 | 67% helix, 4% strand | Q61327 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 771 | 0.77 | 0.81 | 71 | empty |
| 2 | 55 | 0.72 | 0.98 | 17 | empty |
| 3 | 63 | 0.41 | 0.81 | 18 | empty |
| 4 | 107 | 0.40 | 0.76 | 23 | empty |
| 5 | 78 | 0.38 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q61327
- Elsewhere: UniProt Q61327 · AlphaFold DB Q61327
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