Research workbench
AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA transporter 1 (P31648)
Analyse AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P31648
- Type
- protein
- Length
- 599 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Sodium- and chloride-dependent GABA transporter 1
- UniProt
- P31648
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 66% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium- and chloride-dependent GABA transporter 1 | protein | 599 | 66% helix, 2% strand | P31648 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 653 | 0.76 | 0.81 | 51 | empty |
| 2 | 421 | 0.59 | 0.75 | 55 | empty |
| 3 | 60 | 0.43 | 0.82 | 17 | empty |
| 4 | 85 | 0.38 | 0.76 | 18 | empty |
| 5 | 75 | 0.36 | 0.76 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31648
- Elsewhere: UniProt P31648 · AlphaFold DB P31648
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