Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha (Q8AY31)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8AY31
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Protein transport protein SEC61 subunit alpha
- UniProt
- Q8AY31
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 63% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC61 subunit alpha | protein | 476 | 63% helix, 7% strand | Q8AY31 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1003 | 0.76 | 0.79 | 84 | empty |
| 2 | 620 | 0.68 | 0.77 | 63 | empty |
| 3 | 69 | 0.47 | 0.83 | 14 | empty |
| 4 | 93 | 0.36 | 0.74 | 15 | empty |
| 5 | 77 | 0.35 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8AY31
- Elsewhere: UniProt Q8AY31 · AlphaFold DB Q8AY31
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