Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC16B (Q6BCB4)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC16B (Q6BCB4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6BCB4
- Type
- protein
- Length
- 1,045 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaC0be3EEc1211561285218819705F98450F3f3B8
- Molecule
- Protein transport protein SEC16B
- UniProt
- Q6BCB4
- Pockets
- 8 · best druggability 0.69
Structure
1 distinct chain · 25% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC16B | protein | 1045 | 25% helix, 2% strand | Q6BCB4 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 473 | 0.69 | 0.79 | 53 | empty |
| 2 | 646 | 0.68 | 0.76 | 57 | empty |
| 3 | 265 | 0.57 | 0.78 | 20 | empty |
| 4 | 231 | 0.50 | 0.75 | 25 | empty |
| 5 | 130 | 0.44 | 0.77 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6BCB4
- Elsewhere: UniProt Q6BCB4 · AlphaFold DB Q6BCB4
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