Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC16A (O15027)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC16A (O15027) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O15027
- Type
- protein
- Length
- 2,357 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x60b588AdB9eC3Ae190f6dfe62fBd8F2eb45726FD
- Molecule
- Protein transport protein SEC16A
- UniProt
- O15027
- Pockets
- 7 · best druggability 0.69
Structure
1 distinct chain · 10% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC16A | protein | 2357 | 10% helix, 1% strand | O15027 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 622 | 0.69 | 0.78 | 58 | empty |
| 2 | 494 | 0.68 | 0.78 | 47 | empty |
| 3 | 147 | 0.44 | 0.76 | 30 | empty |
| 4 | 109 | 0.36 | 0.73 | 18 | empty |
| 5 | 52 | 0.33 | 0.78 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O15027
- Elsewhere: UniProt O15027 · AlphaFold DB O15027
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