Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein sec-16A.1 (P34643)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein sec-16A.1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P34643
- Type
- protein
- Length
- 1,232 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3f489E003F4ab9107BF0c3b4F75547915DFC6dA0
- Molecule
- Protein transport protein sec-16A.1
- UniProt
- P34643
- Pockets
- 12 · best druggability 0.68
Structure
1 distinct chain · 30% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein sec-16A.1 | protein | 1232 | 30% helix, 2% strand | P34643 |
Pockets
12 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 588 | 0.68 | 0.78 | 68 | empty |
| 2 | 401 | 0.63 | 0.77 | 34 | empty |
| 3 | 218 | 0.58 | 0.80 | 30 | empty |
| 4 | 222 | 0.52 | 0.76 | 26 | empty |
| 5 | 119 | 0.52 | 0.81 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P34643
- Elsewhere: UniProt P34643 · AlphaFold DB P34643
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