Research workbench
AlphaFold monomer V2.0 prediction for peptide antibiotic transporter sbma (P0AFY7)
Analyse AlphaFold monomer V2.0 prediction for peptide antibiotic transporter sbma… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AFY7
- Type
- protein
- Length
- 406 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC51AAe4Cb53B659c60B10bbf8c60DBDcfBeBfafd
- Molecule
- Peptide antibiotic transporter sbma
- UniProt
- P0AFY7
- Pockets
- 3 · best druggability 0.79
Structure
1 distinct chain · 80% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptide antibiotic transporter sbma | protein | 406 | 80% helix, 1% strand | P0AFY7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 870 | 0.79 | 0.81 | 59 | empty |
| 2 | 105 | 0.35 | 0.73 | 22 | empty |
| 3 | 57 | 0.30 | 0.75 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AFY7
- Elsewhere: UniProt P0AFY7 · AlphaFold DB P0AFY7
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