Research workbench

AlphaFold monomer V2.0 prediction for neutral amino acid transporter a (P43007)

Analyse AlphaFold monomer V2.0 prediction for neutral amino acid transporter a (P43007) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P43007
Type: protein
Length: 532 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
Molecule: Neutral amino acid transporter a
UniProt: P43007
Pockets: 5 · best druggability 0.73

Structure

1 distinct chain · 67% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Neutral amino acid transporter a	protein	532	67% helix, 5% strand	P43007

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	407	0.73	0.83	46	empty
2	383	0.59	0.75	38	empty
3	127	0.42	0.75	20	empty
4	134	0.40	0.73	19	empty
5	79	0.36	0.76	18	empty

Compared structures

7P4I · Structure of human ASCT1 transporter · an experimental structure of the same protein · chain A against B, TM-score 0.51
7P4I · Structure of human ASCT1 transporter · an experimental structure of the same protein · chain A against A, TM-score 0.51

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P43007
Elsewhere: UniProt P43007 · AlphaFold DB P43007

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