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AlphaFold monomer V2.0 prediction for histone deacetylase complex subunit SAP30 (O88574)

Analyse AlphaFold monomer V2.0 prediction for histone deacetylase complex subunit SAP30… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O88574
Type: protein
Length: 220 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5b528f903830232B2AE32bD924DF439A2CA30548
Molecule: Histone deacetylase complex subunit SAP30
UniProt: O88574
Pockets: 1 · best druggability 0.46

Structure

1 distinct chain · 37% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Histone deacetylase complex subunit SAP30	protein	220	37% helix, 5% strand	O88574

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	138	0.46	0.77	26	empty

Compared structures

2LD7 · Solution structure of the MSIN3A PAH3-SAP30 sid complex · an experimental structure of the same protein · chain A against A, TM-score 0.38
2LD7 · Solution structure of the mSin3A PAH3-SAP30 SID complex · an experimental structure of the same protein · chain A against A, TM-score 0.38

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O88574
Elsewhere: UniProt O88574 · AlphaFold DB O88574

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