Research workbench
AlphaFold monomer V2.0 prediction for levanase (P05656)
Analyse AlphaFold monomer V2.0 prediction for levanase (P05656) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P05656
- Type
- protein
- Length
- 677 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x934012E5e4f386C982279c76c4Af0Ebf43E47f3F
- Molecule
- Levanase
- UniProt
- P05656
- Pockets
- 7 · best druggability 0.66
Structure
1 distinct chain · 2% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Levanase | protein | 677 | 2% helix, 53% strand | P05656 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.66 | 0.88 | 24 | empty |
| 2 | 310 | 0.60 | 0.78 | 33 | empty |
| 3 | 127 | 0.47 | 0.78 | 20 | empty |
| 4 | 75 | 0.45 | 0.81 | 21 | empty |
| 5 | 71 | 0.34 | 0.76 | 17 | empty |
Compared structures
- 4B1M · Carbohydrate binding module CBM66 from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
- 4B1M · Carbohydrate binding module CBM66 from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
- 4AZZ · Carbohydrate binding module CBM66 from Bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
- 4AZZ · Carbohydrate binding module CBM66 from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
- 4B1L · Carbohydrate binding module CBM66 from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
- 4B1L · Carbohydrate binding module CBM66 from bacillus subtilis · an experimental structure of the same protein · chain A against A, TM-score 0.24
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P05656
- Elsewhere: UniProt P05656 · AlphaFold DB P05656
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