Research workbench
AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid transporter B(0)AT1 (Q9D687)
Analyse AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9D687
- Type
- protein
- Length
- 634 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x886Dae96aAa5c835D77d6cf98f83e8f54b36220C
- Molecule
- Sodium-dependent neutral amino acid transporter B(0)AT1
- UniProt
- Q9D687
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 70% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium-dependent neutral amino acid transporter B(0)AT1 | protein | 634 | 70% helix, 2% strand | Q9D687 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 736 | 0.75 | 0.80 | 59 | empty |
| 2 | 759 | 0.66 | 0.74 | 62 | empty |
| 3 | 98 | 0.37 | 0.75 | 19 | empty |
| 4 | 77 | 0.34 | 0.74 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9D687
- Elsewhere: UniProt Q9D687 · AlphaFold DB Q9D687
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