Research workbench
AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid transporter B(0)AT3 (O88576)
Analyse AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O88576
- Type
- protein
- Length
- 615 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9855FD82Ed9e47E60B62109309EC45f878A8a43D
- Molecule
- Sodium-dependent neutral amino acid transporter B(0)AT3
- UniProt
- O88576
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 73% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium-dependent neutral amino acid transporter B(0)AT3 | protein | 615 | 73% helix, 2% strand | O88576 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 749 | 0.80 | 0.84 | 55 | empty |
| 2 | 265 | 0.55 | 0.76 | 35 | empty |
| 3 | 134 | 0.45 | 0.77 | 26 | empty |
| 4 | 124 | 0.36 | 0.73 | 21 | empty |
| 5 | 67 | 0.36 | 0.77 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O88576
- Elsewhere: UniProt O88576 · AlphaFold DB O88576
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