Research workbench
AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid transporter B(0)AT2 (Q8BG16)
Analyse AlphaFold monomer V2.0 prediction for sodium-dependent neutral amino acid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BG16
- Type
- protein
- Length
- 729 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Sodium-dependent neutral amino acid transporter B(0)AT2
- UniProt
- Q8BG16
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 65% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium-dependent neutral amino acid transporter B(0)AT2 | protein | 729 | 65% helix, 3% strand | Q8BG16 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 569 | 0.78 | 0.84 | 44 | empty |
| 2 | 319 | 0.64 | 0.80 | 42 | empty |
| 3 | 385 | 0.60 | 0.76 | 48 | empty |
| 4 | 232 | 0.56 | 0.79 | 32 | empty |
| 5 | 151 | 0.40 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BG16
- Elsewhere: UniProt Q8BG16 · AlphaFold DB Q8BG16
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