Research workbench
AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA transporter 2 (A5PJX7)
Analyse AlphaFold monomer V2.0 prediction for sodium- and chloride-dependent GABA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5PJX7
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Sodium- and chloride-dependent GABA transporter 2
- UniProt
- A5PJX7
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 68% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium- and chloride-dependent GABA transporter 2 | protein | 602 | 68% helix, 1% strand | A5PJX7 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1057 | 0.81 | 0.82 | 90 | empty |
| 2 | 116 | 0.55 | 0.84 | 20 | empty |
| 3 | 61 | 0.53 | 0.87 | 16 | empty |
| 4 | 169 | 0.41 | 0.73 | 30 | empty |
| 5 | 100 | 0.32 | 0.73 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5PJX7
- Elsewhere: UniProt A5PJX7 · AlphaFold DB A5PJX7
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