Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha isoform 2 (Q9H9S3)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9H9S3
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x942A92ee72eC160e5F130822A2087F929bD89118
- Molecule
- Protein transport protein SEC61 subunit alpha isoform 2
- UniProt
- Q9H9S3
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 64% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC61 subunit alpha isoform 2 | protein | 476 | 64% helix, 7% strand | Q9H9S3 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1060 | 0.78 | 0.80 | 88 | empty |
| 2 | 492 | 0.65 | 0.77 | 55 | empty |
| 3 | 105 | 0.41 | 0.77 | 14 | empty |
| 4 | 96 | 0.38 | 0.75 | 16 | empty |
| 5 | 51 | 0.33 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H9S3
- Elsewhere: UniProt Q9H9S3 · AlphaFold DB Q9H9S3
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