Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha isoform 2 (Q2KHX4)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2KHX4
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Protein transport protein SEC61 subunit alpha isoform 2
- UniProt
- Q2KHX4
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 63% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC61 subunit alpha isoform 2 | protein | 476 | 63% helix, 7% strand | Q2KHX4 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1054 | 0.78 | 0.80 | 89 | empty |
| 2 | 595 | 0.68 | 0.77 | 63 | empty |
| 3 | 76 | 0.34 | 0.75 | 14 | empty |
| 4 | 58 | 0.32 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2KHX4
- Elsewhere: UniProt Q2KHX4 · AlphaFold DB Q2KHX4
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