Research workbench
AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit alpha isoform 1 (P61620)
Analyse AlphaFold monomer V2.0 prediction for protein transport protein SEC61 subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61620
- Type
- protein
- Length
- 476 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x34DF1A00AA3FD36DDB63AbDb6642A9c6847BbA0A
- Molecule
- Protein transport protein SEC61 subunit alpha isoform 1
- UniProt
- P61620
- Pockets
- 6 · best druggability 0.77
Structure
1 distinct chain · 64% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein transport protein SEC61 subunit alpha isoform 1 | protein | 476 | 64% helix, 7% strand | P61620 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1088 | 0.77 | 0.79 | 87 | empty |
| 2 | 464 | 0.64 | 0.77 | 46 | empty |
| 3 | 120 | 0.49 | 0.80 | 27 | empty |
| 4 | 114 | 0.40 | 0.75 | 14 | empty |
| 5 | 94 | 0.38 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61620
- Elsewhere: UniProt P61620 · AlphaFold DB P61620
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