Research workbench
AlphaFold monomer V2.0 prediction for ribitol-5-phosphate xylosyltransferase 1 (Q9Y2B1)
Analyse AlphaFold monomer V2.0 prediction for ribitol-5-phosphate xylosyltransferase 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y2B1
- Type
- protein
- Length
- 443 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5E056bd75926860B577Ca60b9E4B107e4344B5c1
- Molecule
- Ribitol-5-phosphate xylosyltransferase 1
- UniProt
- Q9Y2B1
- Pockets
- 5 · best druggability 0.73
Structure
1 distinct chain · 41% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribitol-5-phosphate xylosyltransferase 1 | protein | 443 | 41% helix, 17% strand | Q9Y2B1 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 560 | 0.73 | 0.81 | 62 | empty |
| 2 | 132 | 0.47 | 0.78 | 17 | empty |
| 3 | 83 | 0.36 | 0.76 | 16 | empty |
| 4 | 52 | 0.28 | 0.75 | 16 | empty |
| 5 | 69 | 0.27 | 0.72 | 14 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y2B1
- Elsewhere: UniProt Q9Y2B1 · AlphaFold DB Q9Y2B1
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