Research workbench
AlphaFold monomer V2.0 prediction for rxlr effector protein PITG_16705 (D0NVF3)
Analyse AlphaFold monomer V2.0 prediction for rxlr effector protein PITG_16705 (D0NVF3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D0NVF3
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9Ea1c8D4c1A5bDE0a3a9E14459F06eb4dcf9FEf1
- Molecule
- Rxlr effector protein PITG_16705
- UniProt
- D0NVF3
- Pockets
- 4 · best druggability 0.48
Structure
1 distinct chain · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rxlr effector protein PITG_16705 | protein | 678 | 68% helix, 0% strand | D0NVF3 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.48 | 0.81 | 14 | empty |
| 2 | 129 | 0.47 | 0.78 | 21 | empty |
| 3 | 94 | 0.36 | 0.75 | 15 | empty |
| 4 | 66 | 0.33 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0NVF3
- Elsewhere: UniProt D0NVF3 · AlphaFold DB D0NVF3
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