Research workbench
AlphaFold monomer V2.0 prediction for rtx-III toxin determinant a from serotype 2 (P55130)
Analyse AlphaFold monomer V2.0 prediction for rtx-III toxin determinant a from serotype… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P55130
- Type
- protein
- Length
- 1,049 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa3452b8cEc5f7d4aA7eA35d2483a9795B3ae3C17
- Molecule
- Rtx-III toxin determinant a from serotype 2
- UniProt
- P55130
- Pockets
- 11 · best druggability 0.83
Structure
1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rtx-III toxin determinant a from serotype 2 | protein | 1049 | 39% helix, 25% strand | P55130 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 778 | 0.83 | 0.86 | 97 | empty |
| 2 | 446 | 0.76 | 0.84 | 57 | empty |
| 3 | 290 | 0.61 | 0.79 | 34 | empty |
| 4 | 102 | 0.50 | 0.81 | 16 | empty |
| 5 | 111 | 0.43 | 0.77 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55130
- Elsewhere: UniProt P55130 · AlphaFold DB P55130
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