Research workbench
AlphaFold monomer V2.0 prediction for 28S ribosomal protein S22, mitochondrial (P82650)
Analyse AlphaFold monomer V2.0 prediction for 28S ribosomal protein S22, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P82650
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- 28S ribosomal protein S22, mitochondrial
- UniProt
- P82650
- Pockets
- 4 · best druggability 0.52
Structure
1 distinct chain · 45% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 28S ribosomal protein S22, mitochondrial | protein | 360 | 45% helix, 4% strand | P82650 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 86 | 0.52 | 0.84 | 17 | empty |
| 2 | 109 | 0.49 | 0.81 | 21 | empty |
| 3 | 132 | 0.41 | 0.75 | 16 | empty |
| 4 | 132 | 0.41 | 0.74 | 20 | empty |
Compared structures
- 7P2E · Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PO2 · Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet… · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PO1 · Initiation complex of human mitochondrial ribosome small subunit with IF3 · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PO3 · Human mitochondrial ribosome small subunit · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 8QRL · mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2 · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PNX · Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in… · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PNZ · Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in… · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PNY · Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in… · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7PO0 · Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in… · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 6RW4 · Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3 · an experimental structure of the same protein · chain A against R, TM-score 0.81
- 7QI4 · Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA) · an experimental structure of the same protein · chain A against AR, TM-score 0.81
- 7QI5 · Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A… · an experimental structure of the same protein · chain A against AR, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P82650
- Elsewhere: UniProt P82650 · AlphaFold DB P82650
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