GL1X · GenesisL1 explorer

Research workbench

AlphaFold monomer V2.0 prediction for regulator of TY1 transposition protein 103 (Q05543)

Analyse AlphaFold monomer V2.0 prediction for regulator of TY1 transposition protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
Q05543
Type
protein
Length
409 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
Molecule
Regulator of TY1 transposition protein 103
UniProt
Q05543
Pockets
2 · best druggability 0.55

Structure

1 distinct chain · 52% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ARegulator of TY1 transposition protein 103protein40952% helix, 0% strandQ05543

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1810.550.8613empty
21460.380.7221empty

Compared structures

  • 2KM4 · Solution structure of RTT103 ctd interacting domain · an experimental structure of the same protein · chain A against A, TM-score 0.33
  • 2KM4 · Solution structure of Rtt103 CTD interacting domain · an experimental structure of the same protein · chain A against A, TM-score 0.33
  • 5M9D · Solution structure of RTT103 ctd-interacting domain bound to a SER2SER7 phosphorylated… · an experimental structure of the same protein · chain A against A, TM-score 0.33
  • 5M9D · Solution structure of Rtt103 CTD-interacting domain bound to a Ser2Ser7 phosphorylated… · an experimental structure of the same protein · chain A against A, TM-score 0.33
  • 5LVF · Solution structure of Rtt103 CTD-interacting domain bound to a Thr4 phosphorylated CTD… · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 5LVF · Solution structure of RTT103 ctd-interacting domain bound to a THR4 phosphorylated ctd… · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 2L0I · Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD… · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 2L0I · Solution structure of RTT103 ctd-interacting domain bound to a SER2 phosphorylated ctd… · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 5WOZ · NMR solution structure of RTT103 (rtt) protein using two 4D-spectra · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 5WOZ · NMR solution structure of Rtt103 (RTT) protein using two 4D-spectra · an experimental structure of the same protein · chain A against A, TM-score 0.32
  • 5M48 · Coiled coil domain of RTT103P · an experimental structure of the same protein · chain A against A, TM-score 0.27
  • 5M48 · Coiled coil domain of Rtt103p · an experimental structure of the same protein · chain A against A, TM-score 0.27

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.