Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S2, mitochondrial (Q9GCB9)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S2, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9GCB9
- Type
- protein
- Length
- 219 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Ribosomal protein S2, mitochondrial
- UniProt
- Q9GCB9
- Pockets
- 3 · best druggability 0.46
Structure
1 distinct chain · 47% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S2, mitochondrial | protein | 219 | 47% helix, 16% strand | Q9GCB9 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.46 | 0.76 | 21 | empty |
| 2 | 109 | 0.45 | 0.78 | 21 | empty |
| 3 | 91 | 0.35 | 0.74 | 20 | empty |
Compared structures
- 6XYW · Structure of the plant mitochondrial ribosome · an experimental structure of the same protein · chain A against Ba, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9GCB9
- Elsewhere: UniProt Q9GCB9 · AlphaFold DB Q9GCB9
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