Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (Q3KHD6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3KHD6
- Type
- protein
- Length
- 260 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x772Ab9c83CD1f043C1F4260A1CaF6597998cE1BA
- Molecule
- Ribosomal RNA small subunit methyltransferase J
- UniProt
- Q3KHD6
- Pockets
- 2 · best druggability 0.75
Structure
1 distinct chain · 33% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase J | protein | 260 | 33% helix, 21% strand | Q3KHD6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 697 | 0.75 | 0.81 | 59 | empty |
| 2 | 59 | 0.32 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3KHD6
- Elsewhere: UniProt Q3KHD6 · AlphaFold DB Q3KHD6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.