Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (Q14GA7)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q14GA7
- Type
- protein
- Length
- 241 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Ribosomal RNA small subunit methyltransferase J
- UniProt
- Q14GA7
- Pockets
- 3 · best druggability 0.68
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase J | protein | 241 | 34% helix, 25% strand | Q14GA7 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.68 | 0.90 | 25 | empty |
| 2 | 361 | 0.61 | 0.77 | 38 | empty |
| 3 | 96 | 0.43 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14GA7
- Elsewhere: UniProt Q14GA7 · AlphaFold DB Q14GA7
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