Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (A8A5V4)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8A5V4
- Type
- protein
- Length
- 250 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x027962d3E22fA66bE708fd35b85bEB10f5FE5436
- Molecule
- Ribosomal RNA small subunit methyltransferase J
- UniProt
- A8A5V4
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 38% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase J | protein | 250 | 38% helix, 22% strand | A8A5V4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 463 | 0.70 | 0.81 | 51 | empty |
| 2 | 61 | 0.35 | 0.77 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8A5V4
- Elsewhere: UniProt A8A5V4 · AlphaFold DB A8A5V4
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