Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase J (A4STK0)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4STK0
- Type
- protein
- Length
- 249 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3ec41f9b413220A375Ef4910666Ef7e01d098239
- Molecule
- Ribosomal RNA small subunit methyltransferase J
- UniProt
- A4STK0
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 37% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase J | protein | 249 | 37% helix, 20% strand | A4STK0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 515 | 0.72 | 0.81 | 52 | empty |
| 2 | 111 | 0.42 | 0.77 | 20 | empty |
| 3 | 74 | 0.37 | 0.77 | 15 | empty |
| 4 | 74 | 0.33 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4STK0
- Elsewhere: UniProt A4STK0 · AlphaFold DB A4STK0
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